FT CDS 50..382 FT /note="GENE ID: 2700962 Che9dp001 | gp1 [Mycobacterium FT phage Che9d] (10 or fewer PubMed links) Score = 16 bits FT (408), Expect = 9e-39, Method: Compositional matrix FT adjust. Identities = 86/109 (78%), Positives = 98/109 FT (89%), Gaps = 0/109 (0%) " FT /gene="Mozy0001" FT CDS 682..2169 FT /note="GENE ID: 932339 TM4_04 | putative terminase gp4 FT [Mycobacterium phage TM4] (10 or fewer PubMed links) Score FT = 233 bits (595), Expect = 2e-59, Method: Compositional FT matrix adjust. Identities = 157/470 (33%), Positives = FT 235/470 (50%), Gaps = 22/470 (4%) " FT /gene="Mozy0002" FT CDS 2208..3629 FT /note="GENE ID: 932330 TM4_05 | putative portal gp5 FT [Mycobacterium phage TM4] (10 or fewer PubMed links) Score FT = 577 bits (1486), Expect = 8e-163, Method: FT Compositional matrix adjust. Identities = 293/440 (66%), FT Positives = 349/440 (79%), Gaps = 1/440 (0%) " FT /gene="Mozy0003" FT CDS 3613..4338 FT /note="GENE ID: 932337 TM4_06 | gp6 [Mycobacterium phage FT TM4] (10 or fewer PubMed links) Score = 132 bits (333), FT Expect = 1e-29, Method: Compositional matrix adjust. FT Identities = 96/264 (36%), Positives = 135/264 (51%), Gaps FT = 55/264 (20%) " FT /note="GENE ID: 4157086 Halop4 | gp4 [Mycobacterium phage FT Halo] Score = 111 bits (278), Expect = 4e-23, Method: FT Compositional matrix adjust. Identities = 81/219 (36%), FT Positives = 107/219 (48%), Gaps = 47/219 (21%) " FT /gene="Mozy0004" FT CDS 3755..4300 FT /note="none" FT /gene="Mozy0005" FT CDS 4415..4951 FT /note="GENE ID: 932272 TM4_08 | gp8, similar to r1t gp30 FT [Mycobacterium phage TM4] (10 or fewer PubMed links) Score FT = 140 bits (353), Expect = 4e-32, Method: Compositional FT matrix adjust. Identities = 96/176 (54%), Positives = FT 118/176 (67%), Gaps = 8/176 (4%) " FT /note="GENE ID: 2700967 Che9dp006 | gp6 [Mycobacterium FT phage Che9d] (10 or fewer PubMed links) Score = 75.9 FT bits (185), Expect = 1e-12, Method: Compositional matrix FT adjust. Identities = 53/134 (39%), Positives = 77/134 FT (57%), Gaps = 10/134 (7%) " FT /gene="Mozy0006" FT CDS 5014..5922 FT /note="GENE ID: 932268 TM4_09 | major capsid subunit gp9 FT [Mycobacterium phage TM4] (10 or fewer PubMed links) Score FT = 451 bits (1160), Expect = 3e-125, Method: FT Compositional matrix adjust. Identities = 222/303 (73%), FT Positives = 258/303 (85%), Gaps = 4/303 (1%) " FT /note="" FT /gene="Mozy0007" FT CDS 5936..6307 FT /note="GENE ID: 932265 TM4_10 | gp10 [Mycobacterium phage FT TM4] (10 or fewer PubMed links) Score = 89.4 bits (220), FT Expect = 6e-17, Method: Compositional matrix adjust. FT Identities = 51/123 (41%), Positives = 68/123 (55%), Gaps FT = 2/123 (1%) " FT /gene="Mozy0008" FT CDS 6304..6636 FT /note="GENE ID: 5758718 P9_gp008 | gp8 [Mycobacterium FT phage Tweety] (10 or fewer PubMed links) Score = 216 FT bits (549), Expect = 5e-55, Method: Compositional matrix FT adjust. Identities = 108/110 (98%), Positives = 109/110 FT (99%), Gaps = 0/110 (0%) " FT /note="GENE ID: 1259001 Che8p008 | gp8 [Mycobacterium FT phage Che8] (10 or fewer PubMed links) Score = 172 bits FT (436), Expect = 6e-42, Method: Compositional matrix FT adjust. Identities = 83/108 (76%), Positives = 92/108 FT (85%), Gaps = 0/108 (0%) " FT /gene="Mozy0009" FT CDS 6639..6968 FT /note="GENE ID: 5758657 P9_gp009 | gp9 [Mycobacterium FT phage Tweety] (10 or fewer PubMed links) Score = 216 FT bits (550), Expect = 3e-55, Method: Compositional matrix FT adjust. Identities = 104/109 (95%), Positives = 106/109 FT (97%), Gaps = 0/109 (0%) " FT /note="GENE ID: 4157230 Llijp9 | gp9 [Mycobacterium phage FT Llij] Score = 204 bits (518), Expect = 2e-51, Method: FT Compositional matrix adjust. Identities = 96/108 (88%), FT Positives = 102/108 (94%), Gaps = 0/108 (0%) " FT /gene="Mozy0010" FT CDS 6955..7362 FT /note=" GENE ID: 5758652 P9_gp010 | gp10 [Mycobacterium FT phage Tweety] (10 or fewer PubMed links) Score = 263 FT bits (671), Expect = 4e-69, Method: Compositional matrix FT adjust. Identities = 130/135 (96%), Positives = 133/135 FT (98%), Gaps = 0/135 (0%) GENE ID: 4157231 Llijp10 | gp10 FT [Mycobacterium phage Llij] Score = 191 bits (484), FT Expect = 2e-47, Method: Compositional matrix adjust. FT Identities = 94/134 (70%), Positives = 108/134 (80%), Gaps FT = 0/134 (0%)" FT /gene="Mozy0011" FT CDS 7499..8296 FT /note="GENE ID: 4157232 Llijp11 | gp11 [Mycobacterium FT phage Llij] Score = 532 bits (1371), Expect = 9e-150, FT Method: Compositional matrix adjust. Identities = 256/265 FT (96%), Positives = 260/265 (98%), Gaps = 0/265 (0%) GENE FT ID: 5758697 P9_gp011 | gp11 [Mycobacterium phage Tweety] FT (10 or fewer PubMed links) Score = 532 bits (1370), FT Expect = 1e-149, Method: Compositional matrix adjust. FT Identities = 256/265 (96%), Positives = 260/265 (98%), FT Gaps = 0/265 (0%)" FT /gene="Mozy0012" FT CDS 8435..8986 FT /note="GENE ID: 5758717 P9_gp012 | gp12 [Mycobacterium FT phage Tweety] (10 or fewer PubMed links) Score = 357 FT bits (915), Expect = 2e-97, Method: Compositional matrix FT adjust. Identities = 174/183 (95%), Positives = 178/183 FT (97%), Gaps = 0/183 (0%) GENE ID: 1258984 Che8p012 | gp12 FT [Mycobacterium phage Che8] (10 or fewer PubMed links) FT Score = 348 bits (894), Expect = 7e-95, Method: FT Compositional matrix adjust. Identities = 168/183 (91%), FT Positives = 175/183 (95%), Gaps = 0/183 (0%)" FT /gene="Mozy0013" FT CDS 9036..9371 FT /note="GENE ID: 5758674 P9_gp013 | gp13 [Mycobacterium FT phage Tweety] (10 or fewer PubMed links) Score = 218 FT bits (554), Expect = 1e-55, Method: Compositional matrix FT adjust. Identities = 109/111 (98%), Positives = 110/111 FT (99%), Gaps = 0/111 (0%) GENE ID: 4157234 Llijp13 | gp13 FT [Mycobacterium phage Llij] Score = 209 bits (532), FT Expect = 5e-53, Method: Compositional matrix adjust. FT Identities = 105/111 (94%), Positives = 108/111 (97%), FT Gaps = 0/111 (0%)" FT /gene="Mozy0014" FT CDS 9389..12919 FT /note=" GENE ID: 5758689 P9_gp014 | gp14 [Mycobacterium FT phage Tweety] (10 or fewer PubMed links) Score = 1970 FT bits (5103), Expect = 0.0, Method: Compositional matrix FT adjust. Identities = 1116/1178 (94%), Positives = FT 1133/1178 (96%), Gaps = 4/1178 (0%) GENE ID: 4157235 FT Llijp14 | gp14 [Mycobacterium phage Llij] Score = 1628 FT bits (4217), Expect = 0.0, Method: Compositional matrix FT adjust. Identities = 980/1201 (81%), Positives = FT 1032/1201 (85%), Gaps = 63/1201 (5%)" FT /gene="Mozy0015" FT CDS 12920..14629 FT /note="GENE ID: 1259018 Che8p015 | gp15 [Mycobacterium FT phage Che8] (10 or fewer PubMed links) Score = 1139 bits FT (2946), Expect = 0.0, Method: Compositional matrix FT adjust. Identities = 546/569 (95%), Positives = 558/569 FT (98%), Gaps = 0/569 (0%) GENE ID: 5758678 P9_gp015 | FT gp15 [Mycobacterium phage Tweety] (10 or fewer PubMed FT links) Score = 1122 bits (2901), Expect = 0.0, Method: FT Compositional matrix adjust. Identities = 552/569 (97%), FT Positives = 560/569 (98%), Gaps = 0/569 (0%)" FT /gene="Mozy0016" FT CDS 14715..16424 FT /note="gb|AAN12414.1| gp16 [Mycobacteriophage Che8] FT Length=569 GENE ID: 1259042 Che8p016 | gp16 FT [Mycobacterium phage Che8] (10 or fewer PubMed links) FT Score = 1166 bits (3016), Expect = 0.0, Method: FT Compositional matrix adjust. Identities = 562/569 (98%), FT Positives = 568/569 (99%), Gaps = 0/569 (0% gb|ABQ86085.1| FT gp16 [Mycobacterium phage Tweety] Length=569 GENE ID: FT 5758667 P9_gp016 | gp16 [Mycobacterium phage Tweety] (10 FT or fewer PubMed links) Score = 1163 bits (3008), Expect = FT 0.0, Method: Compositional matrix adjust. Identities = FT 561/569 (98%), Positives = 567/569 (99%), Gaps = 0/569 FT (0%) " FT /gene="" FT /gene="Mozy0017" FT CDS 16466..17311 FT /note=" gb|AAN12415.1| gp17 [Mycobacteriophage Che8] FT Length=281 GENE ID: 1258968 Che8p017 | gp17 FT [Mycobacterium phage Che8] (10 or fewer PubMed links) FT Score = 545 bits (1403), Expect = 2e-153, Method: FT Compositional matrix adjust. Identities = 271/281 (96%), FT Positives = 278/281 (98%), Gaps = 0/281 (0%) FT gb|ABD58233.1| gp17 [Mycobacteriophage Llij] Length=281 FT GENE ID: 4157238 Llijp17 | gp17 [Mycobacterium phage Llij] FT Score = 541 bits (1393), Expect = 2e-152, Method: FT Compositional matrix adjust. Identities = 270/281 (96%), FT Positives = 276/281 (98%), Gaps = 0/281 (0%) " FT /gene="Mozy0018" FT CDS 17308..19845 FT /note="gb|ABQ86087.1| gp18 [Mycobacterium phage Tweety] FT Length=845 GENE ID: 5758665 P9_gp018 | gp18 FT [Mycobacterium phage Tweety] (10 or fewer PubMed links) FT Score = 1463 bits (3788), Expect = 0.0, Method: FT Compositional matrix adjust. Identities = 816/845 (96%), FT Positives = 832/845 (98%), Gaps = 0/845 (0%) FT gb|ABD58234.1| gp18 [Mycobacteriophage Llij] FT gb|ABE67519.1| gp18 [Mycobacteriophage PMC] Length=845 FT GENE ID: 4157239 Llijp18 | gp18 [Mycobacterium phage Llij] FT Score = 1432 bits (3707), Expect = 0.0, Method: FT Compositional matrix adjust. Identities = 800/845 (94%), FT Positives = 819/845 (96%), Gaps = 0/845 (0%)" FT /gene="Mozy0019" FT CDS 19842..21728 FT /note="gb|AAN12683.1| gp39 [Mycobacterium phage Omega] FT Length=628 GENE ID: 1260138 Omegap041 | gp39 FT [Mycobacterium phage Omega] (10 or fewer PubMed links) FT Score = 1260 bits (3260), Expect = 0.0, Method: FT Compositional matrix adjust. Identities = 620/628 (98%), FT Positives = 623/628 (99%), Gaps = 0/628 (0%) FT gb|ABQ86088.1| gp19 [Mycobacterium phage Tweety] FT Length=628 GENE ID: 5758640 P9_gp019 | gp19 FT [Mycobacterium phage Tweety] (10 or fewer PubMed links) FT Score = 1254 bits (3246), Expect = 0.0, Method: FT Compositional matrix adjust. Identities = 617/628 (98%), FT Positives = 622/628 (99%), Gaps = 0/628 (0%) " FT /gene="Mozy0020" FT CDS 21689..22804 FT /note=" gb|AAN12419.1| gp21 [Mycobacteriophage Che8] FT Length=388 GENE ID: 1259045 Che8p021 | gp21 FT [Mycobacterium phage Che8] (10 or fewer PubMed links) FT Score = 589 bits (1519), Expect = 1e-166, Method: FT Compositional matrix adjust. Identities = 321/388 (82%), FT Positives = 340/388 (87%), Gaps = 29/388 (7%) FT gb|ABD58236.1| gp20 [Mycobacteriophage Llij] FT gb|ABE67521.1| gp20 [Mycobacteriophage PMC] Length=388 FT GENE ID: 4157241 Llijp20 | gp20 [Mycobacterium phage Llij] FT Score = 576 bits (1485), Expect = 8e-163, Method: FT Compositional matrix adjust. Identities = 311/388 (80%), FT Positives = 333/388 (85%), Gaps = 29/388 (7%) " FT /gene="Mozy0021" FT CDS 22822..23163 FT /note="gb|AAN12420.1| gp22 [Mycobacteriophage Che8] FT Length=113 GENE ID: 1258992 Che8p022 | gp22 FT [Mycobacterium phage Che8] (10 or fewer PubMed links) FT Score = 211 bits (536), Expect = 1e-53, Method: FT Compositional matrix adjust. Identities = 111/113 (98%), FT Positives = 111/113 (98%), Gaps = 0/113 (0%) FT gb|AAN12685.1| gp41 [Mycobacterium phage Omega] FT Length=113 GENE ID: 1260122 Omegap043 | gp41 FT [Mycobacterium phage Omega] (10 or fewer PubMed links) FT Score = 207 bits (528), Expect = 1e-52, Method: FT Compositional matrix adjust. Identities = 109/113 (96%), FT Positives = 110/113 (97%), Gaps = 0/113 (0%)" FT /gene="Mozy0022" FT CDS 23458..24096 FT /note="gb|AAN12422.1| gp24 [Mycobacteriophage Che8] FT Length=212 GENE ID: 1258969 Che8p024 | gp24 FT [Mycobacterium phage Che8] (10 or fewer PubMed links) FT Score = 391 bits (1005), Expect = 1e-107, Method: FT Compositional matrix adjust. Identities = 195/212 (91%), FT Positives = 203/212 (95%), Gaps = 0/212 (0%) FT gb|ABD58239.1| gp23 [Mycobacteriophage Llij] FT gb|ABE67524.1| gp23 [Mycobacteriophage PMC] Length=212 FT GENE ID: 4157244 Llijp23 | gp23 [Mycobacterium phage Llij] FT Score = 307 bits (786), Expect = 3e-82, Method: FT Compositional matrix adjust. Identities = 166/222 (74%), FT Positives = 181/222 (81%), Gaps = 20/222 (9%) " FT /gene="Mozy0023" FT CDS 24093..24989 FT /note="gb|AAN12688.1| gp44 [Mycobacterium phage Omega] FT Length=326 GENE ID: 1260020 Omegap046 | gp44 FT [Mycobacterium phage Omega] (10 or fewer PubMed links) FT Score = 318 bits (816), Expect = 2e-85, Method: FT Compositional matrix adjust. Identities = 283/326 (86%), FT Positives = 290/326 (88%), Gaps = 28/326 (8%) FT gb|ABQ86094.1| gp25 [Mycobacterium phage Tweety] FT Length=326 GENE ID: 5758646 P9_gp025 | gp25 FT [Mycobacterium phage Tweety] (10 or fewer PubMed links) FT Score = 303 bits (776), Expect = 8e-81, Method: FT Compositional matrix adjust. Identities = 284/326 (87%), FT Positives = 290/326 (88%), Gaps = 28/326 (8%) " FT /gene="Mozy0024" FT CDS 25340..25624 FT /note="gb|ABD58242.1| gp26 [Mycobacteriophage Llij] FT gb|ABE67527.1| gp26 [Mycobacteriophage PMC] FT gb|ABQ86096.1| gp27 [Mycobacterium phage Tweety] FT Length=94 GENE ID: 4157247 Llijp26 | gp26 [Mycobacterium FT phage Llij] Score = 186 bits (473), Expect = 3e-46, FT Method: Compositional matrix adjust. Identities = 93/94 FT (98%), Positives = 94/94 (100%), Gaps = 0/94 (0%) FT gb|AAN07947.1| gp29 [Mycobacteriophage Che9d] Length=98 FT GENE ID: 2700880 Che9dp029 | gp29 [Mycobacterium phage FT Che9d] (10 or fewer PubMed links) Score = 135 bits FT (340), Expect = 9e-31, Method: Compositional matrix FT adjust. Identities = 69/98 (70%), Positives = 75/98 FT (76%), Gaps = 4/98 (4%) " FT /gene="Mozy0025" FT CDS 25802..26233 FT /note=" GENE ID: 1259054 Che8p031 | gp31 [Mycobacterium FT phage Che8] (10 or fewer PubMed links) Score = 147 bits FT (372), Expect = 2e-34, Method: Compositional matrix FT adjust. Identities = 77/77 (100%), Positives = 77/77 FT (100%), Gaps = 0/77 (0%) " FT /note=">gb|AAG48317.1|AF319619_1 gp1 [Mycobacterium phage FT Ms6] Length=77 Score = 134 bits (336), Expect = 2e-30, FT Method: Compositional matrix adjust. Identities = 68/77 FT (88%), Positives = 73/77 (94%), Gaps = 0/77 (0%)" FT /gene="Mozy0026" FT CDS 26116..27420 FT /note=" GENE ID: 4157198 Llijp30 | gp30 [Mycobacterium FT phage Llij] Score = 765 bits (1975), Expect = 0.0, FT Method: Compositional matrix adjust. Identities = 370/397 FT (93%), Positives = 379/397 (95%), Gaps = 1/397 (0%)" FT /note=">gb|AAG48318.1|AF319619_2 gp2 [Mycobacterium phage FT Ms6] Length=384 Score = 735 bits (1897), Expect = 0.0, FT Method: Compositional matrix adjust. Identities = 354/381 FT (92%), Positives = 364/381 (95%), Gaps = 1/381 (0%) " FT /gene="Mozy0027" FT CDS complement(27759..27911) FT /gene="Mozy0028c" FT CDS 28064..29236 FT /note=" GENE ID: 1259057 Che8p033 | gp33 [Mycobacterium FT phage Che8] (10 or fewer PubMed links) Score = 667 bits FT (1720), Expect = 0.0, Method: Compositional matrix FT adjust. Identities = 320/333 (96%), Positives = 324/333 FT (97%), Gaps = 0/333 (0%)" FT /note="GENE ID: 4157199 Llijp31 | gp31 [Mycobacterium FT phage Llij] Score = 657 bits (1695), Expect = 0.0, FT Method: Compositional matrix adjust. Identities = 313/333 FT (93%), Positives = 321/333 (96%), Gaps = 0/333 (0%) " FT /gene="Mozy0029" FT CDS complement(29221..29442) FT /gene="Mozy0030c" FT CDS 29467..29856 FT /note="GENE ID: 4157201 Llijp33 | gp33 [Mycobacterium FT phage Llij] Score = 241 bits (614), Expect = 1e-62, FT Method: Compositional matrix adjust. Identities = 123/124 FT (99%), Positives = 124/124 (100%), Gaps = 0/124 (0%)" FT /note=">gb|AAG48321.1|AF319619_5 gp5 [Mycobacterium phage FT Ms6] Length=124 Score = 238 bits (606), Expect = FT 1e-61, Method: Compositional matrix adjust. Identities = FT 121/124 (97%), Positives = 124/124 (100%), Gaps = 0/124 FT (0%) " FT /gene="Mozy0031" FT CDS 29881..30114 FT /gene="Mozy0032" FT CDS 30065..30922 FT /note=" GENE ID: 5758664 P9_gp035 | gp35 [Mycobacterium FT phage Tweety] (10 or fewer PubMed links) Score = 562 FT bits (1448), Expect = 1e-158, Method: Compositional FT matrix adjust. Identities = 271/273 (99%), Positives = FT 272/273 (99%), Gaps = 0/273 (0%)" FT /note="GENE ID: 1258967 Che8p037 | gp37 [Mycobacterium FT phage Che8] (10 or fewer PubMed links) Score = 560 bits FT (1443), Expect = 4e-158, Method: Compositional matrix FT adjust. Identities = 270/273 (98%), Positives = 271/273 FT (99%), Gaps = 0/273 (0%) " FT /gene="Mozy0033" FT CDS 30923..31228 FT /note=" GENE ID: 1259068 Che8p038 | gp38 [Mycobacterium FT phage Che8] (10 or fewer PubMed links) Score = 179 bits FT (454), Expect = 5e-44, Method: Compositional matrix FT adjust. Identities = 86/96 (89%), Positives = 93/96 FT (96%), Gaps = 0/96 (0%)" FT /note=" GENE ID: 1259068 Che8p038 | gp38 [Mycobacterium FT phage Che8] (10 or fewer PubMed links) Score = 179 bits FT (454), Expect = 5e-44, Method: Compositional matrix FT adjust. Identities = 86/96 (89%), Positives = 93/96 FT (96%), Gaps = 0/96 (0%)" FT /gene="Mozy0034" FT CDS 32038..32385 FT /note=" GENE ID: 2721805 MAP3742 | hypothetical protein FT [Mycobacterium avium subsp. paratuberculosis K-10] (10 or FT fewer PubMed links) Score = 35.0 bits (79), Expect = FT 1.7, Method: Compositional matrix adjust. Identities = FT 23/81 (28%), Positives = 37/81 (45%), Gaps = 7/81 (8%)" FT /note=" gb|EDQ66527.1| Gene info predicted protein FT [Physcomitrella patens subsp. patens] Length=885 Score = FT 34.7 bits (78), Expect = 2.1, Method: Composition-based FT stats. Identities = 17/54 (31%), Positives = 26/54 (48%), FT Gaps = 3/54 (5%)" FT /gene="Mozy0035" FT CDS complement(32349..32517) FT /gene="Mozy0036c" FT CDS complement(32831..33067) FT /note="GENE ID: 1258996 Che8p043 | gp43 [Mycobacterium FT phage Che8] (10 or fewer PubMed links) Score = 156 bits FT (395), Expect = 3e-37, Method: Compositional matrix FT adjust. Identities = 78/78 (100%), Positives = 78/78 FT (100%), Gaps = 0/78 (0%) GENE ID: 5758672 P9_gp039 | gp39 FT [Mycobacterium phage Tweety] (10 or fewer PubMed links) FT Score = 96.3 bits (238), Expect = 6e-19, Method: FT Compositional matrix adjust. Identities = 48/75 (64%), FT Positives = 59/75 (78%), Gaps = 1/75 (1%) " FT /gene="Mozy0037c" FT CDS complement(33113..33280) FT /note="GENE ID: 920141 Bxb1p71 | gp71 [Mycobacterium phage FT Bxb1] (10 or fewer PubMed links) Score = 63.5 bits FT (153), Expect = 4e-09, Method: Compositional matrix FT adjust. Identities = 31/45 (68%), Positives = 34/45 FT (75%), Gaps = 0/45 (0%) " FT /gene="Mozy0038c" FT CDS complement(33312..33482) FT /note="no significant hits" FT /gene="Mozy0039c" FT CDS 33845..33964 FT /note="no significant similarity found" FT /gene="Mozy0040" FT CDS complement(33957..34202) FT /note=" GENE ID: 1259341 Che9cp39 | gp38 [Mycobacterium FT phage Che9c] (10 or fewer PubMed links) Score = 68.6 FT bits (166), Expect = 1e-10, Method: Compositional matrix FT adjust. Identities = 34/51 (66%), Positives = 42/51 FT (82%), Gaps = 0/51 (0%) " FT /gene="Mozy0041c" FT CDS 34469..35587 FT /note="ref|YP_711998.1| Integrase [Frankia alni ACN14a] FT Length=405 GENE ID: 4232373 FRAAL1760 | Integrase FT [Frankia alni ACN14a] Score = 211 bits (538), Expect = FT 4e-53, Method: Compositional matrix adjust. Identities = FT 144/373 (38%), Positives = 199/373 (53%), Gaps = 32/373 FT (8%) ref|YP_001361441.1| phage integrase family protein FT [Kineococcus radiotolerans SRS30216] Length=402 GENE ID: FT 5336811 Krad_1691 | phage integrase family protein FT [Kineococcus radiotolerans SRS30216] Score = 196 bits FT (497), Expect = 2e-48, Method: Compositional matrix FT adjust. Identities = 132/386 (34%), Positives = 201/386 FT (52%), Gaps = 26/386 (6%) " FT /gene="Integrase" FT /gene="Mozy0042" FT CDS complement(35686..36096) FT /note="GENE ID: 1259003 Che8p047 | gp47 [Mycobacterium FT phage Che8] (10 or fewer PubMed links) Score = 243 bits FT (621), Expect = 2e-63, Method: Compositional matrix FT adjust. Identities = 129/136 (94%), Positives = 132/136 FT (97%), Gaps = 0/136 (0%) GENE ID: 5758680 P9_gp044 | gp44 FT [Mycobacterium phage Tweety] (10 or fewer PubMed links) FT Score = 228 bits (581), Expect = 9e-59, Method: FT Compositional matrix adjust. Identities = 132/139 (94%), FT Positives = 133/139 (95%), Gaps = 3/139 (2%) " FT /gene="Mozy0043c" FT CDS 36398..37018 FT /note="No Significant Hits" FT /gene="Mozy0044" FT CDS 37137..37370 FT /note="ref|YP_655039.1| gp43 [Mycobacterium phage Llij] FT gb|ABD58259.1| gp43 [Mycobacteriophage Llij] Length=70 FT GENE ID: 4157211 Llijp43 | gp43 [Mycobacterium phage Llij] FT Score = 138 bits (348), Expect = 9e-32, Method: FT Compositional matrix adjust. Identities = 69/70 (98%), FT Positives = 70/70 (100%), Gaps = 0/70 (0%) FT ref|YP_655802.1| gp41 [Mycobacterium phage PMC] FT gb|ABE67542.1| gp41 [Mycobacteriophage PMC] Length=70 FT GENE ID: 4157665 PMCp41 | gp41 [Mycobacterium phage PMC] FT (10 or fewer PubMed links) Score = 138 bits (347), FT Expect = 1e-31, Method: Compositional matrix adjust. FT Identities = 68/70 (97%), Positives = 70/70 (100%), Gaps = FT 0/70 (0%) " FT /gene="Transcriptional Regulator" FT /gene="Mozy0045" FT CDS 37865..38746 FT /note="ref|YP_655040.1| gp44 [Mycobacterium phage Llij] FT Length=288 GENE ID: 4157212 Llijp44 | gp44 FT [Mycobacterium phage Llij] Score = 328 bits (840), FT Expect = 2e-88, Method: Compositional matrix adjust. FT Identities = 171/211 (81%), Positives = 181/211 (85%), FT Gaps = 13/211 (6%) ref|NP_817387.1| gp49 [Mycobacterium FT phage Che8] Length=288 GENE ID: 1259005 Che8p049 | gp49 FT [Mycobacterium phage Che8] (10 or fewer PubMed links) FT Score = 324 bits (831), Expect = 3e-87, Method: FT Compositional matrix adjust. Identities = 159/167 (95%), FT Positives = 163/167 (97%), Gaps = 0/167 (0%) " FT /gene="Anti-Repressor" FT /gene="Mozy0046" FT CDS 39039..39254 FT /note="ref|NP_817389.1| gp51 [Mycobacterium phage Che8] FT gb|AAN12449.1| gp51 [Mycobacteriophage Che8] Length=71 FT GENE ID: 1259011 Che8p051 | gp51 [Mycobacterium phage FT Che8] (10 or fewer PubMed links) Score = 121 bits FT (304), Expect = 1e-26, Method: Compositional matrix FT adjust. Identities = 62/71 (87%), Positives = 64/71 FT (90%), Gaps = 1/71 (1%) ref|YP_655804.1| gp43 FT [Mycobacterium phage PMC] ref|YP_001469281.1| gp48 FT [Mycobacterium phage Tweety] gb|ABE67544.1| gp43 FT [Mycobacteriophage PMC] gb|ABQ86117.1| gp48 FT [Mycobacterium phage Tweety] Length=71 GENE ID: 4157667 FT PMCp43 | gp43 [Mycobacterium phage PMC] (10 or fewer FT PubMed links) Score = 107 bits (267), Expect = 2e-22, FT Method: Compositional matrix adjust. Identities = 52/71 FT (73%), Positives = 64/71 (90%), Gaps = 1/71 (1%) " FT /gene="gp" FT /gene="Mozy0047" FT CDS 39967..40683 FT /note="ref|YP_655046.1| gp50 [Mycobacterium phage Llij] FT Length=194 GENE ID: 4157153 Llijp50 | gp50 FT [Mycobacterium phage Llij] Score = 171 bits (432), FT Expect = 3e-41, Method: Compositional matrix adjust. FT Identities = 138/226 (61%), Positives = 148/226 (65%), FT Gaps = 34/226 (15%) ref|YP_655811.1| gp50 [Mycobacterium FT phage PMC] Length=207 GENE ID: 4157605 PMCp50 | gp50 FT [Mycobacterium phage PMC] (10 or fewer PubMed links) Score FT = 144 bits (362), Expect = 5e-33, Method: Compositional FT matrix adjust. Identities = 109/246 (44%), Positives = FT 131/246 (53%), Gaps = 61/246 (24%) " FT /gene="gp50" FT /gene="Mozy0048" FT CDS 41036..41383 FT /note="ref|YP_655814.1| gp53 [Mycobacterium phage PMC] FT Length=115 GENE ID: 4157608 PMCp53 | gp53 [Mycobacterium FT phage PMC] (10 or fewer PubMed links) Score = 230 bits FT (587), Expect = 1e-59, Method: Compositional matrix FT adjust. Identities = 110/115 (95%), Positives = 112/115 FT (97%), Gaps = 0/115 (0%) ref|YP_001469289.1| gp56 FT [Mycobacterium phage Tweety] Length=115 GENE ID: 5758663 FT P9_gp056 | gp56 [Mycobacterium phage Tweety] (10 or fewer FT PubMed links) Score = 225 bits (573), Expect = 5e-58, FT Method: Compositional matrix adjust. Identities = 106/115 FT (92%), Positives = 112/115 (97%), Gaps = 0/115 (0%) " FT /gene="Hypothetical" FT /gene="Mozy0049" FT CDS 41847..42359 FT /note="ref|YP_655050.1| gp54 [Mycobacterium phage Llij] FT Length=161 GENE ID: 4157157 Llijp54 | gp54 FT [Mycobacterium phage Llij] Score = 323 bits (827), FT Expect = 2e-87, Method: Compositional matrix adjust. FT Identities = 160/161 (99%), Positives = 161/161 (100%), FT Gaps = 0/161 (0%) ref|YP_655816.1| gp55 [Mycobacterium FT phage PMC] Length=161 GENE ID: 4157610 PMCp55 | gp55 FT [Mycobacterium phage PMC] (10 or fewer PubMed links) Score FT = 321 bits (822), Expect = 1e-86, Method: Compositional FT matrix adjust. Identities = 159/161 (98%), Positives = FT 160/161 (99%), Gaps = 0/161 (0%) " FT /gene="gp54-55" FT /gene="Mozy0050" FT CDS 42356..42637 FT /note="ref|YP_655817.1| gp56 [Mycobacterium phage PMC] FT Length=94 GENE ID: 4157611 PMCp56 | gp56 [Mycobacterium FT phage PMC] (10 or fewer PubMed links) Score = 181 bits FT (458), Expect = 1e-44, Method: Compositional matrix FT adjust. Identities = 90/94 (95%), Positives = 92/94 FT (97%), Gaps = 1/94 (1%) ref|YP_655051.1| gp55 FT [Mycobacterium phage Llij] Length=94 GENE ID: 4157158 FT Llijp55 | gp55 [Mycobacterium phage Llij] Score = 176 FT bits (447), Expect = 2e-43, Method: Compositional matrix FT adjust. Identities = 88/94 (93%), Positives = 91/94 FT (96%), Gaps = 1/94 (1%) " FT /gene="Transcription Factor" FT /gene="Mozy0051" FT CDS 42634..42999 FT /note="ref|YP_655052.1| gp56 [Mycobacterium phage Llij] FT Length=121 GENE ID: 4157159 Llijp56 | gp56 FT [Mycobacterium phage Llij] Score = 246 bits (627), FT Expect = 3e-64, Method: Compositional matrix adjust. FT Identities = 118/121 (97%), Positives = 119/121 (98%), FT Gaps = 0/121 (0%) ref|YP_655818.1| gp57 [Mycobacterium FT phage PMC] Length=121 GENE ID: 4157612 PMCp57 | gp57 FT [Mycobacterium phage PMC] (10 or fewer PubMed links) Score FT = 246 bits (627), Expect = 3e-64, Method: Compositional FT matrix adjust. Identities = 119/121 (98%), Positives = FT 119/121 (98%), Gaps = 0/121 (0%) " FT /gene="gp56-57" FT /gene="Mozy0052" FT CDS 43620..44501 FT /note="ref|NP_817407.1| gp69 [Mycobacterium phage Che8] FT Length=293 GENE ID: 1259031 Che8p069 | gp69 FT [Mycobacterium phage Che8] (10 or fewer PubMed links) FT Score = 592 bits (1525), Expect = 1e-167, Method: FT Compositional matrix adjust. Identities = 286/293 (97%), FT Positives = 291/293 (99%), Gaps = 0/293 (0%) FT ref|YP_117696.1| hypothetical protein nfa14870 [Nocardia FT farcinica IFM 10152] Length=297 GENE ID: 3107407 FT nfa14870 | hypothetical protein [Nocardia farcinica IFM FT 10152] (10 or fewer PubMed links) Score = 343 bits FT (880), Expect = 6e-93, Method: Compositional matrix FT adjust. Identities = 165/288 (57%), Positives = 218/288 FT (75%), Gaps = 1/288 (0%) " FT /gene="Hypothetical" FT /gene="Mozy0053" FT CDS 45140..45289 FT /note="ref|NP_818052.1| gp79 [Mycobacterium phage Che9d] FT Length=49 GENE ID: 2700930 Che9dp079 | gp79 FT [Mycobacterium phage Che9d] (10 or fewer PubMed links) FT Score = 101 bits (252), Expect = 1e-20, Method: FT Compositional matrix adjust. Identities = 48/49 (97%), FT Positives = 49/49 (100%), Gaps = 0/49 (0%) FT ref|NP_817411.1| gp73 [Mycobacterium phage Che8] FT ref|YP_001469301.1| gp68 [Mycobacterium phage Tweety] FT Length=48 GENE ID: 1259027 Che8p073 | gp73 FT [Mycobacterium phage Che8] (10 or fewer PubMed links) FT Score = 100 bits (248), Expect = 3e-20, Method: FT Compositional matrix adjust. Identities = 47/48 (97%), FT Positives = 47/48 (97%), Gaps = 0/48 (0%) " FT /gene="gp" FT /gene="Mozy0054" FT CDS 45917..46729 FT /note="ref|YP_001552392.1| gp63 [Mycobacterium phage FT Giles] Length=359 GENE ID: 5758897 Giles_gp63 | gp63 FT [Mycobacterium phage Giles] Score = 71.6 bits (174), FT Expect = 4e-11, Method: Compositional matrix adjust. FT Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps FT = 17/134 (12%) ref|YP_001361508.1| hypothetical protein FT Krad_1758 [Kineococcus radiotolerans SRS30216] Length=279 FT GENE ID: 5334361 Krad_1758 | hypothetical protein FT [Kineococcus radiotolerans SRS30216] Score = 63.5 bits FT (153), Expect = 9e-09, Method: Compositional matrix FT adjust. Identities = 45/120 (37%), Positives = 61/120 FT (50%), Gaps = 16/120 (13%) " FT /gene="Hypothetical" FT /gene="Mozy0055" FT CDS 47671..47970 FT /note="ref|NP_818378.1| gp77 [Mycobacterium phage Omega] FT Length=93 GENE ID: 1260070 Omegap079 | gp77 FT [Mycobacterium phage Omega] (10 or fewer PubMed links) FT Score = 82.4 bits (202), Expect = 5e-15, Method: FT Compositional matrix adjust. Identities = 45/99 (45%), FT Positives = 59/99 (59%), Gaps = 8/99 (8%) ref|NP_817491.1| FT gp41 [Mycobacterium phage Cjw1] ref|YP_654799.1| gp44 FT [Mycobacterium phage 244] Length=154 GENE ID: 1259112 FT CJW1p041 | gp41 [Mycobacterium phage Cjw1] (10 or fewer FT PubMed links) Score = 77.0 bits (188), Expect = 3e-13, FT Method: Compositional matrix adjust. Identities = 46/122 FT (37%), Positives = 60/122 (49%), Gaps = 23/122 (18%) " FT /gene="Mozy0056" FT CDS 48176..48460 FT /note=" GENE ID: 4157180 Llijp77 | gp77 [Mycobacterium FT phage Llij] Score = 191 bits (485), Expect = 1e-47, FT Method: Compositional matrix adjust. Identities = 93/94 FT (98%), Positives = 93/94 (98%), Gaps = 0/94 (0%) " FT /note=" GENE ID: 4157682 PMCp78 | gp78 [Mycobacterium FT phage PMC] (10 or fewer PubMed links) Score = 189 bits FT (480), Expect = 4e-47, Method: Compositional matrix FT adjust. Identities = 92/94 (97%), Positives = 92/94 FT (97%), Gaps = 0/94 (0%) " FT /gene="Mozy0057" FT CDS 48453..48797 FT /note=" GENE ID: 1259056 Che8p087 | gp87 [Mycobacterium FT phage Che8] (10 or fewer PubMed links) Score = 122 bits FT (306), Expect = 7e-27, Method: Compositional matrix FT adjust. Identities = 75/124 (60%), Positives = 85/124 FT (68%), Gaps = 12/124 (9%) " FT /note=" GENE ID: 4157181 Llijp78 | gp78 [Mycobacterium FT phage Llij] Score = 120 bits (300), Expect = 4e-26, FT Method: Compositional matrix adjust. Identities = 62/62 FT (100%), Positives = 62/62 (100%), Gaps = 0/62 (0%) " FT /gene="Mozy0058" FT CDS 48794..49126 FT /note=" GENE ID: 4156871 Caterap15 | gp15 [Mycobacterium FT phage Catera] (10 or fewer PubMed links) Score = 215 FT bits (548), Expect = 6e-55, Method: Compositional matrix FT adjust. Identities = 108/110 (98%), Positives = 110/110 FT (100%), Gaps = 0/110 (0%) " FT /note=" GENE ID: 1259911 Bxz1p020 | gp20 [Mycobacterium FT phage Bxz1] (10 or fewer PubMed links) Score = 179 bits FT (454), Expect = 5e-44, Method: Compositional matrix FT adjust. Identities = 99/110 (90%), Positives = 107/110 FT (97%), Gaps = 0/110 (0%) " FT /gene="Mozy0059" FT CDS 49147..49494 FT /note="GENE ID: 1259112 CJW1p041 | gp41 [Mycobacterium FT phage Cjw1] (10 or fewer PubMed links) Score = 172 bits FT (437), Expect = 4e-42, Method: Compositional matrix FT adjust. Identities = 88/115 (76%), Positives = 94/115 FT (81%), Gaps = 1/115 (0%) " FT /note=" GENE ID: 5758637 P9_gp086 | gp86 [Mycobacterium FT phage Tweety] (10 or fewer PubMed links) Score = 117 FT bits (292), Expect = 3e-25, Method: Compositional matrix FT adjust. Identities = 72/115 (62%), Positives = 72/115 FT (62%), Gaps = 29/115 (25%) " FT /gene="Mozy0060" FT CDS 50563..50757 FT /note="none" FT /gene="Mozy0061" FT CDS 51725..52252 FT /note=" GENE ID: 4157171 Llijp68 | gp68 [Mycobacterium FT phage Llij] Score = 75.9 bits (185), Expect = 1e-12, FT Method: Compositional matrix adjust. Identities = 36/70 FT (51%), Positives = 46/70 (65%), Gaps = 0/70 (0%) " FT /note=" GENE ID: 3106814 nfa14910 | hypothetical protein FT [Nocardia farcinica IFM 10152] (10 or fewer PubMed links) FT Score = 53.1 bits (126), Expect = 8e-06, Method: FT Compositional matrix adjust. Identities = 28/75 (37%), FT Positives = 42/75 (56%), Gaps = 0/75 (0%) " FT /gene="Mozy0062" FT CDS 52249..52920 FT /note=" GENE ID: 2700955 Che9dp104 | gp104 [Mycobacterium FT phage Che9d] (10 or fewer PubMed links) Score = 260 FT bits (664), Expect = 6e-68, Method: Compositional matrix FT adjust. Identities = 130/230 (56%), Positives = 163/230 FT (70%), Gaps = 18/230 (7%) " FT /note=" GENE ID: 1258981 Che8p100 | gp100 [Mycobacterium FT phage Che8] (10 or fewer PubMed links) Score = 103 bits FT (258), Expect = 7e-21, Method: Compositional matrix FT adjust. Identities = 70/232 (30%), Positives = 106/232 FT (45%), Gaps = 36/232 (15%) " FT /gene="Mozy0063" FT CDS 53430..53843 FT /note="GENE ID: 4157214 Llijp93 | gp93 [Mycobacterium FT phage Llij] Score = 250 bits (639), Expect = 2e-65, FT Method: Compositional matrix adjust. Identities = 124/137 FT (90%), Positives = 129/137 (94%), Gaps = 0/137 (0%) " FT /note="GENE ID: 4157597 PMCp97 | gp97 [Mycobacterium phage FT PMC] (10 or fewer PubMed links) Score = 237 bits (605), FT Expect = 2e-61, Method: Compositional matrix adjust. FT Identities = 116/132 (87%), Positives = 125/132 (94%), FT Gaps = 0/132 (0%) " FT /gene="Mozy0064" FT CDS 54253..55689 FT /note=" GENE ID: 4157600 PMCp100 | gp100 [Mycobacterium FT phage PMC] (10 or fewer PubMed links) Score = 927 bits FT (2396), Expect = 0.0, Method: Compositional matrix FT adjust. Identities = 436/478 (91%), Positives = 455/478 FT (95%), Gaps = 0/478 (0%) " FT /note=" GENE ID: 4157217 Llijp96 | gp96 [Mycobacterium FT phage Llij] Score = 918 bits (2372), Expect = 0.0, FT Method: Compositional matrix adjust. Identities = 432/479 FT (90%), Positives = 458/479 (95%), Gaps = 1/479 (0%) " FT /gene="Mozy0065" FT CDS 55692..55904 FT /note=" GENE ID: 4157218 Llijp97 | gp97 [Mycobacterium FT phage Llij] Score = 137 bits (344), Expect = 2e-31, FT Method: Compositional matrix adjust. Identities = 64/68 FT (94%), Positives = 66/68 (97%), Gaps = 0/68 (0%) " FT /note=" GENE ID: 4157601 PMCp101 | gp101 [Mycobacterium FT phage PMC] (10 or fewer PubMed links) Score = 136 bits FT (342), Expect = 4e-31, Method: Compositional matrix FT adjust. Identities = 64/70 (91%), Positives = 66/70 FT (94%), Gaps = 0/70 (0%) " FT /gene="Mozy0066" FT CDS 55944..56417 FT /note=" GENE ID: 4157602 PMCp102 | gp102 [Mycobacterium FT phage PMC] (10 or fewer PubMed links) Score = 290 bits FT (742), Expect = 2e-77, Method: Compositional matrix FT adjust. Identities = 135/157 (85%), Positives = 146/157 FT (92%), Gaps = 0/157 (0%) " FT /gene="Mozy0067" FT CDS 56387..57025 FT /note=" GENE ID: 4157603 PMCp103 | gp103 [Mycobacterium FT phage PMC] (10 or fewer PubMed links) Score = 362 bits FT (928), Expect = 1e-98, Method: Compositional matrix FT adjust. Identities = 178/207 (85%), Positives = 182/207 FT (87%), Gaps = 4/207 (1%) " FT /note=" GENE ID: 1259067 Che8p110 | gp110 [Mycobacterium FT phage Che8] (10 or fewer PubMed links) Score = 356 bits FT (913), Expect = 7e-97, Method: Compositional matrix FT adjust. Identities = 176/201 (87%), Positives = 180/201 FT (89%), Gaps = 4/201 (1%) " FT /gene="Mozy0068"