• About Arabidopsis thaliana

• Arabidopsis Databases (overlapping data presented in different ways)
• TAIR - The Arabidopsis Information Resource
• TIGR - The Institute for Genomic Research
• NCBI - National Center for Biotechnology Information
• MIPS - Munich Information Center for Protein Sequences
• KAOS - Kazusa Japan  DNA Research Institute

• Identifying Genes
• BLAST at TAIR or NCBI
• Gene name search at TIGR, TAIR, or NCBI

• Subsets of genes
• AraCyc: Arabidopsis Biochemical Pathways
• Gene Families
• CaZY-  Carbohydrate-Active enZYmes (not just Arabidopsis)
• Membrane proteins - Ward laboratory, University of Minnesota
• Seed ESTs - Benning lab, Michigan State University

• T-DNA insertion mutants
• SIGnAL Arabidopsis Gene Mapping Tool - Salk Institute
• Syngenta Arabidopsis Insertion Library "SAIL" - Torrey Mesa Research Institute

• Expression data
• Tissue specific expression of all genes - Allometra
• Search Plant Physiology or The Plant Cell papers

• Subcellular location prediction programs
• TargetP
• PSORT

1/6/03 Copyright (C) 2003, Jonathan Monroe, monroejd@jmu.edu. All rights reserved.
URL: http://csm.jmu.edu/biology/courses/bio455_555/atlinks.html