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Week of: |
Activities |
Resources |
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Introductions |
Intro to Project 1
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January 19 |
No Class MLK Day Hypothesis- Due Wednesday, January 21 in Lecture |
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Protein Extraction/ Quantification |
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Western Blot - plan on 1 hour of work outside of the lab the day after your lab |
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DNA Extraction |
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March 2
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Lab Exam Due Friday March 20 |
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Guest Lectures - Week of March 2 |
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March 9 |
No Lab Spring Break |
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RNA Isolation from Yeast Microarray Paper Presentation Due- April 6 |
RNA Quality Guide
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Hybridization and Washing (much of this will take place at alternative class times)
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Array Analysis I - Gridding the Arrays
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Before Class take the time to look at the following: A short Movie on how your arrays were scanned: http://gcat.davidson.edu/sybr-u/scanning_at_davidson.mov Flash Tutorials On Microarray Analysis- Creating a New Project, Mouse Gridding V2.X and Segmentation Please Print out a Copy of: Scanalyze Guide Useful Links for Class: GCAT Information |
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Array Analysis II- Statistical Analysis of your Array Data and Beginning Data Interpretation |
Before class take the time to look at the following: Stats Analysis Prepared by Alexa Romasco Stats Analysis Prepared by Charlie Cuccherini Flash Tutorials On Microarray Analysis- Expression Menu, Exploring, and Clustering Useful Links for Class: A word document prepared by a former BIO 480 student on statistical analysis of arrays: StatisticalAnalysis.doc |
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Stanford Microarray Database |
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Array Analysis IV -Individualized Work
Due Friday May 1 by 5 p.m. |